C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PRP3 pre-mRNA processing factor 3 homolog (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161476 Prpf3-002 ENSMUSG00000015748 10090 - 3:95830622-95855753 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartLiverMuscleOvaryPlacentaTestisENSMUST00000161476
Transcript ID Bladder Brain Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000161476 1.694±0.15 2.169±0.79 0.533±0.00 0.961±0.86 3.618±0.62 5.150±2.84 8.413±5.57 1.808±0.83

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000244 ISS spliceosomal tri-snRNP complex assembly
GO:0005634 ISS nucleus
GO:0005681 IEA spliceosomal complex
GO:0046540 IEA U4/U6 x U5 tri-snRNP complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000324862 PRPF3-001 protein_coding Homo_sapiens 0 3003
ENST00000467329 PRPF3-007 processed_transcript Homo_sapiens 0 1681
ENST00000470824 PRPF3-005 processed_transcript Homo_sapiens 0 435
ENST00000476970 PRPF3-004 processed_transcript Homo_sapiens 0 198
ENST00000496202 PRPF3-002 processed_transcript Homo_sapiens 0 715
ENST00000519029 RP11-409C19.2-001 processed_pseudogene Homo_sapiens 0 1797

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