C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mediator complex subunit 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161598 Med6-004 ENSMUSG00000002679 10090 - 12:81573560-81594963 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonLiverOvaryENSMUST00000161598
Transcript ID Adipose Adrenal Breast Colon Liver Ovary
ENSMUST00000161598 0.914±0.00 0.752±0.02 2.047±0.90 1.218±0.37 1.573±0.36 1.247±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WZ CIL_0002WZ_0003 CGP 12:81573557-81664941

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001104 IEA RNA polymerase II transcription cofactor activity
GO:0003677 IDA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0016592 ISO mediator complex
GO:0019827 IMP stem cell maintenance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000256379 MED6-001 protein_coding Homo_sapiens 0 697
ENST00000430055 MED6-004 protein_coding Homo_sapiens 0 599
ENST00000440435 MED6-002 protein_coding Homo_sapiens 0 865
ENST00000553523 MED6-011 retained_intron Homo_sapiens 0 364
ENST00000553611 MED6-006 retained_intron Homo_sapiens 0 440
ENST00000554870 MED6-003 retained_intron Homo_sapiens 0 525
ENST00000554963 MED6-012 protein_coding Homo_sapiens 0 697
ENST00000556044 MED6-007 processed_transcript Homo_sapiens 0 671
ENST00000556423 MED6-008 retained_intron Homo_sapiens 0 405
ENST00000556495 MED6-005 retained_intron Homo_sapiens 0 693
ENST00000615788 MED6-201 protein_coding Homo_sapiens 0 697

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