C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: FYVE, RhoGEF and PH domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161624 Fgd4-009 ENSMUSG00000022788 10090 - 16:16487115-16600345 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000161624
Transcript ID Adipose Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000161624 0.904±0.00 7.767±3.12 1.388±0.59 0.793±0.06 1.239±0.15 0.835±0.37 1.351±0.00 2.248±1.51 1.475±0.24 4.071±3.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000395740 FGD4-003 nonsense_mediated_decay Homo_sapiens 0 261
ENST00000427716 FGD4-001 protein_coding Homo_sapiens 0 261
ENST00000472289 FGD4-005 protein_coding Homo_sapiens 0 261
ENST00000473513 FGD4-008 processed_transcript Homo_sapiens 0 261
ENST00000490682 CASP8-008 processed_transcript Homo_sapiens 0.0000000000002 82
ENST00000493087 FGD4-002 nonsense_mediated_decay Homo_sapiens 0 261
ENST00000525053 FGD4-011 protein_coding Homo_sapiens 0 261
ENST00000531134 FGD4-010 protein_coding Homo_sapiens 0 261
ENST00000534526 FGD4-013 protein_coding Homo_sapiens 0 261
ENST00000551984 FGD4-014 nonsense_mediated_decay Homo_sapiens 0 263
ENST00000583694 FGD4-017 protein_coding Homo_sapiens 0 259

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