C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: FYVE, RhoGEF and PH domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000551984 FGD4-014 ENSG00000139132 9606 + 12:32502157-32640748 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaTestisENST00000551984
Transcript ID Placenta Testis
ENST00000551984 1.081±0.00 10.442±8.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003DJ CIL_0003DJ_0002 CGP 12:32106835-32646050

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161861 Fgd4-001 protein_coding Mus_musculus 0 2218
ENSMUST00000162671 Fgd4-008 protein_coding Mus_musculus 0 2150
ENSMUST00000069284 Fgd4-006 protein_coding Mus_musculus 0 2126
ENSMUST00000161188 Fgd4-201 protein_coding Mus_musculus 0 1515
ENSMUST00000172181 Fgd4-002 protein_coding Mus_musculus 0 1515
ENSMUST00000162124 Fgd4-004 protein_coding Mus_musculus 0 1221
ENSMUST00000162045 Fgd4-003 protein_coding Mus_musculus 0 1221
ENSMUST00000159542 Fgd4-010 protein_coding Mus_musculus 0 761
ENSMUST00000159058 Fgd4-005 retained_intron Mus_musculus 0 536
ENSMUST00000161624 Fgd4-009 retained_intron Mus_musculus 0 263
ENSMUST00000162542 Fgd4-011 retained_intron Mus_musculus 0 261
ENSMUST00000162414 Fgd4-007 retained_intron Mus_musculus 0 261

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