C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAD52 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161816 Rad52-003 ENSMUSG00000030166 10090 + 6:119902728-119921315 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000161816
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000161816 2.647±0.27 2.824±0.54 3.691±0.57 2.105±0.20 2.118±0.57 1.179±0.13 1.600±0.30 1.709±0.68 2.897±0.27 0.709±0.15 3.412±1.19 3.110±1.03 0.886±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TY CIL_0007TY_0002 VISTA 6:119665436-120266145
CIL_0008AW CIL_0008AW_0002 VISTA 6:119874234-120475208
CIL_0006C0 CIL_0006C0_0002 CGP 6:119902698-120038672

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000228345 RAD52-014 retained_intron Homo_sapiens 0 270
ENST00000358495 RAD52-001 protein_coding Homo_sapiens 0 708
ENST00000397230 RAD52-007 protein_coding Homo_sapiens 0 370
ENST00000430095 RAD52-008 protein_coding Homo_sapiens 0 708
ENST00000461568 RAD52-002 nonsense_mediated_decay Homo_sapiens 0 370
ENST00000463750 RAD52-004 retained_intron Homo_sapiens 0 440
ENST00000468231 RAD52-003 nonsense_mediated_decay Homo_sapiens 0 370
ENST00000481052 RAD52-005 retained_intron Homo_sapiens 0 346
ENST00000488642 RAD52-006 retained_intron Homo_sapiens 0 370
ENST00000536177 RAD52-017 protein_coding Homo_sapiens 0 708
ENST00000539046 RAD52-201 protein_coding Homo_sapiens 0 370
ENST00000541619 RAD52-013 protein_coding Homo_sapiens 0 270
ENST00000542584 RAD52-010 processed_transcript Homo_sapiens 0 580
ENST00000542785 RAD52-018 protein_coding Homo_sapiens 0 411
ENST00000543912 RAD52-009 nonsense_mediated_decay Homo_sapiens 0 270
ENST00000544742 RAD52-012 protein_coding Homo_sapiens 0 270
ENST00000545564 RAD52-202 protein_coding Homo_sapiens 0 484
ENST00000545967 RAD52-011 processed_transcript Homo_sapiens 0 355

Loading