C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | ataxin 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000161872  |
Atxn2-008 |
ENSMUSG00000042605 |
10090 | + |
5:121797359-121803435  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008TJ | CIL_0008TJ_0002 | VISTA | 5:121625608-122227679 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000377617
|
ATXN2-001 | protein_coding | Homo_sapiens | 0 | 459 |
|
ENST00000389153
|
ATXN2-002 | protein_coding | Homo_sapiens | 0 | 431 |
|
ENST00000389154
|
ATXN2-004 | protein_coding | Homo_sapiens | 0 | 431 |
|
ENST00000495342
|
ATXN2-010 | retained_intron | Homo_sapiens | 0 | 464 |
|
ENST00000535949
|
ATXN2-016 | protein_coding | Homo_sapiens | 0 | 459 |
|
ENST00000542287
|
ATXN2-011 | protein_coding | Homo_sapiens | 0 | 459 |
|
ENST00000550104
|
ATXN2-201 | protein_coding | Homo_sapiens | 0 | 459 |
|
ENST00000551755
|
ATXN2-021 | nonsense_mediated_decay | Homo_sapiens | 1e-20 | 104 |
|
ENST00000552323
|
ATXN2-022 | retained_intron | Homo_sapiens | 7e-21 | 104 |
|
ENST00000608853
|
ATXN2-025 | protein_coding | Homo_sapiens | 0 | 459 |
|
ENST00000616825
|
ATXN2-202 | protein_coding | Homo_sapiens | 0 | 459 |
