C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mediator complex subunit 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161902 Med6-002 ENSMUSG00000002679 10090 - 12:81579603-81593949 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENSMUST00000161902
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENSMUST00000161902 1.932±0.44 1.315±0.67 2.135±1.77 1.512±0.44 1.301±0.00 2.088±0.09 1.246±0.00 1.662±0.42 2.983±2.00 7.878±0.00 1.936±0.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WZ CIL_0002WZ_0003 CGP 12:81573557-81664941

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001104 IEA RNA polymerase II transcription cofactor activity
GO:0003677 IDA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0016592 ISO mediator complex
GO:0019827 IMP stem cell maintenance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000256379 MED6-001 protein_coding Homo_sapiens 0 771
ENST00000430055 MED6-004 protein_coding Homo_sapiens 0 673
ENST00000439659 MED6P1-001 processed_pseudogene Homo_sapiens 0 193
ENST00000440435 MED6-002 protein_coding Homo_sapiens 0 651
ENST00000553523 MED6-011 retained_intron Homo_sapiens 0 363
ENST00000553611 MED6-006 retained_intron Homo_sapiens 0 556
ENST00000554870 MED6-003 retained_intron Homo_sapiens 0 483
ENST00000554963 MED6-012 protein_coding Homo_sapiens 0 771
ENST00000555296 MED6-010 retained_intron Homo_sapiens 1e-26 124
ENST00000556044 MED6-007 processed_transcript Homo_sapiens 0 745
ENST00000556423 MED6-008 retained_intron Homo_sapiens 0 363
ENST00000556495 MED6-005 retained_intron Homo_sapiens 0 651
ENST00000615788 MED6-201 protein_coding Homo_sapiens 0 771

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