C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 4 (anion exchanger), member 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162049 Slc4a8-002 ENSMUSG00000023032 10090 + 15:100781254-100815935 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000162049
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000162049 0.591±0.26 0.370±0.00 1.000±0.25 2.639±1.62 0.308±0.03 0.246±0.00 1.538±0.39 0.097±0.05 1.040±0.00 0.396±0.26 1.964±0.69 3.835±1.32 4.698±1.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JV CIL_0006JV_0002 CGP 15:100691813-100823968
CIL_0006JW CIL_0006JW_0002 CGP 15:100761747-101045929

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005452 IEA inorganic anion exchanger activity
GO:0005886 IDA plasma membrane
GO:0006814 IEA sodium ion transport
GO:0006820 IEA anion transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0032809 IDA neuronal cell body membrane
GO:0043005 IDA neuron projection
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000112879 SLC4A7-201 protein_coding Danio_rerio 0 424
ENST00000319957 SLC4A8-006 retained_intron Homo_sapiens 0 3411
ENST00000358657 SLC4A8-201 protein_coding Homo_sapiens 0 3771
ENST00000453097 SLC4A8-001 protein_coding Homo_sapiens 0 3771
ENST00000514353 SLC4A8-003 protein_coding Homo_sapiens 0 2307
ENST00000535225 SLC4A8-016 protein_coding Homo_sapiens 0 2130
ENST00000546663 SLC4A8-014 processed_transcript Homo_sapiens 0 671
ENST00000546872 SLC4A8-013 retained_intron Homo_sapiens 0 359
ENST00000547697 SLC4A8-002 retained_intron Homo_sapiens 0 1062
ENST00000548352 SLC4A8-010 processed_transcript Homo_sapiens 0 462
ENST00000551071 SLC4A8-007 retained_intron Homo_sapiens 0 3411
ENST00000552001 SLC4A8-011 retained_intron Homo_sapiens 0 645
ENST00000604314 SLC4A8-019 retained_intron Homo_sapiens 0 3411

Loading