C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0006JW_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000050438-ENSG00000196876 | CGP | 9606 | 12:51391317-51812864  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000139629  (GALNT6)polypeptide N-acetylgalactosaminyltransferase 6 |
ENST00000356317 (GALNT6-001)
|
51353753-51391409 | protein_coding | |
|
ENST00000543196 (GALNT6-002)
|
51351247-51383563 | protein_coding | ||
|
ENST00000603188 (GALNT6-012)
|
51379594-51391434 | protein_coding | ||
|
ENST00000603203 (GALNT6-018)
|
51379786-51391651 | processed_transcript | ||
|
ENST00000603482 (GALNT6-021)
|
51382335-51391675 | processed_transcript | ||
|
ENST00000603563 (GALNT6-015)
|
51379616-51391299 | protein_coding | ||
|
ENST00000603641 (GALNT6-003)
|
51354271-51379781 | nonsense_mediated_decay | ||
|
ENST00000603680 (GALNT6-004)
|
51353769-51360226 | retained_intron | ||
|
ENST00000604381 (GALNT6-008)
|
51379370-51391652 | protein_coding | ||
|
ENST00000604426 (GALNT6-005)
|
51379546-51392867 | protein_coding | ||
|
ENST00000604506 (GALNT6-017)
|
51379712-51391436 | protein_coding | ||
|
ENST00000604847 (GALNT6-011)
|
51379413-51391436 | protein_coding | ||
|
ENST00000605055 (GALNT6-009)
|
51379713-51391652 | protein_coding | ||
|
ENST00000605089 (GALNT6-020)
|
51379841-51391390 | processed_transcript | ||
|
ENST00000605138 (GALNT6-016)
|
51379664-51391629 | protein_coding | ||
|
ENST00000605367 (GALNT6-013)
|
51382461-51391404 | processed_transcript | ||
|
ENST00000605617 (GALNT6-007)
|
51379576-51391663 | protein_coding | ||
|
ENST00000605720 (GALNT6-010)
|
51382461-51391591 | processed_transcript | ||
|
ENST00000605822 (GALNT6-006)
|
51379813-51391955 | processed_transcript | ||
|
ENSG00000196876 (SCN8A) sodium channel, voltage gated, type VIII, alpha subunit |
ENST00000354534 (SCN8A-001)
|
51591236-51812864 | protein_coding | |
|
ENST00000355133 (SCN8A-005)
|
51662818-51807429 | protein_coding | ||
|
ENST00000545061 (SCN8A-201)
|
51591236-51812864 | protein_coding | ||
|
ENST00000546961 (SCN8A-002)
|
51590266-51662820 | processed_transcript | ||
|
ENST00000548086 (SCN8A-006)
|
51774240-51786771 | processed_transcript | ||
|
ENST00000550891 (SCN8A-003)
|
51590926-51766251 | protein_coding | ||
|
ENST00000551216 (SCN8A-004)
|
51686423-51745948 | protein_coding | ||
|
ENST00000599343 (SCN8A-202)
|
51591236-51812864 | protein_coding | ||
|
ENSG00000257851 (HNRNPA3P10) heterogeneous nuclear ribonucleoprotein A3 pseudogene 10 |
ENST00000547726 (HNRNPA3P10-001)
|
51712469-51713606 | processed_pseudogene | |
|
ENSG00000260122 (RP11-923I11.3) |
ENST00000565518 (RP11-923I11.3-001)
|
51809705-51810600 | lincRNA | |
|
ENSG00000271065 (RP11-607P23.1) |
ENST00000604939 (RP11-607P23.1-001)
|
51421956-51424611 | antisense | |
| CIL_0006JW_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000023032-ENSMUSG00000023033 | CGP | 10090 | 15:100761747-101045929 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000023032 (Slc4a8) solute carrier family 4 (anion exchanger), member 8 |
ENSMUST00000023776 (Slc4a8-001)
|
100761747-100823968 | protein_coding | |
|
ENSMUST00000160256 (Slc4a8-003)
|
100761888-100774963 | retained_intron | ||
|
ENSMUST00000161564 (Slc4a8-004)
|
100761869-100775084 | nonsense_mediated_decay | ||
|
ENSMUST00000162049 (Slc4a8-002)
|
100781254-100815935 | protein_coding | ||
|
ENSMUST00000162483 (Slc4a8-006)
|
100812189-100816030 | processed_transcript | ||
|
ENSMUST00000162744 (Slc4a8-007)
|
100814354-100815800 | retained_intron | ||
|
ENSMUST00000162805 (Slc4a8-005)
|
100802748-100806289 | retained_intron | ||
|
ENSMUSG00000023033 (Scn8a) sodium channel, voltage-gated, type VIII, alpha |
ENSMUST00000082209 (Scn8a-201)
|
100870683-101045929 | protein_coding | |
|
ENSMUST00000096198 (Scn8a-202)
|
100933429-100940798 | protein_coding | ||
|
ENSMUST00000108908 (Scn8a-203)
|
100955398-101045929 | protein_coding | ||
|
ENSMUST00000108909 (Scn8a-204)
|
100955398-101045929 | protein_coding | ||
|
ENSMUST00000108910 (Scn8a-205)
|
100936271-101045929 | protein_coding | ||
Expression Patterns
|
