C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: claudin 25
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162057 Cldn25-002 ENSMUSG00000022744 10090 + 16:58727925-58733608 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000162057
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000162057 9.426±4.29 4.926±1.91 8.620±3.41 6.836±1.49 8.457±1.09 5.593±0.61 4.064±0.66 2.010±0.22 7.468±0.96 2.479±0.00 16.559±6.36 3.799±0.81 4.905±2.29

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0016324 IDA apical plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000341181 CLDND1-001 protein_coding Homo_sapiens 0 865
ENST00000394180 CLDND1-004 protein_coding Homo_sapiens 0 1136
ENST00000394181 CLDND1-002 protein_coding Homo_sapiens 0 1090
ENST00000394185 CLDND1-005 protein_coding Homo_sapiens 0 1057
ENST00000502299 CLDND1-013 protein_coding Homo_sapiens 0 909
ENST00000502980 CLDND1-015 retained_intron Homo_sapiens 0 327
ENST00000503004 CLDND1-006 protein_coding Homo_sapiens 0 948
ENST00000503621 CLDND1-016 protein_coding Homo_sapiens 3e-31 139
ENST00000503799 CLDND1-030 nonsense_mediated_decay Homo_sapiens 0 496
ENST00000506575 CLDND1-026 protein_coding Homo_sapiens 0 387
ENST00000506927 CLDND1-029 retained_intron Homo_sapiens 0 399
ENST00000507411 CLDND1-028 retained_intron Homo_sapiens 0 573
ENST00000507874 CLDND1-007 protein_coding Homo_sapiens 0 673
ENST00000507944 CLDND1-019 protein_coding Homo_sapiens 0 623
ENST00000508071 CLDND1-022 protein_coding Homo_sapiens 0 542
ENST00000508503 CLDND1-012 processed_transcript Homo_sapiens 0 656
ENST00000508659 CLDND1-011 protein_coding Homo_sapiens 0 682
ENST00000508902 CLDND1-009 protein_coding Homo_sapiens 0 739
ENST00000510541 CLDND1-017 protein_coding Homo_sapiens 0 342
ENST00000510545 CLDND1-003 protein_coding Homo_sapiens 0 1000
ENST00000511081 CLDND1-014 protein_coding Homo_sapiens 0 520
ENST00000511667 CLDND1-010 protein_coding Homo_sapiens 0 689
ENST00000512147 CLDND1-018 protein_coding Homo_sapiens 0 425
ENST00000512905 CPOX-005 nonsense_mediated_decay Homo_sapiens 0 326
ENST00000513287 CLDND1-023 protein_coding Homo_sapiens 0 833
ENST00000513452 CLDND1-025 protein_coding Homo_sapiens 0 837
ENST00000513873 CLDND1-031 protein_coding Homo_sapiens 8.99998e-41 171
ENST00000513988 CLDND1-027 retained_intron Homo_sapiens 0 436
ENST00000514537 CLDND1-020 protein_coding Homo_sapiens 0 734
ENST00000515620 CLDND1-024 protein_coding Homo_sapiens 0 608

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