C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ring finger protein (C3H2C3 type) 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162219 Rnf6-005 ENSMUSG00000029634 10090 - 5:146211303-146217989 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonOvaryTestisENSMUST00000162219
Transcript ID Breast Colon Ovary Testis
ENSMUST00000162219 5.492±0.59 8.130±2.45 14.244±6.75 30.560±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004MF CIL_0004MF_0002 CGP 5:146209192-146302874

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000346166 RNF6-001 protein_coding Homo_sapiens 0 521
ENST00000381570 RNF6-002 protein_coding Homo_sapiens 0 521
ENST00000381588 RNF6-006 protein_coding Homo_sapiens 0 521
ENST00000468480 RNF6-007 processed_transcript Homo_sapiens 0 252
ENST00000476347 RNF6-005 processed_transcript Homo_sapiens 2e-32 143
ENST00000498039 RNF6-004 processed_transcript Homo_sapiens 0 305

Loading