C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hyaluronan and proteoglycan link protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162352 Hapln2-004 ENSMUSG00000004894 10090 - 3:88022638-88023673 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastLiverLungOvaryPlacentaTestisENSMUST00000162352
Transcript ID Adrenal Bladder Breast Liver Lung Ovary Placenta Testis
ENSMUST00000162352 0.211±0.04 0.017±0.00 0.113±0.04 0.021±0.00 0.166±0.00 0.230±0.08 0.357±0.33 3.341±1.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000850 CIL_000850_0002 VISTA 3:87682625-88286876
CIL_0008JO CIL_0008JO_0002 VISTA 3:87838105-88441065

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000255039 HAPLN2-001 protein_coding Homo_sapiens 0 593
ENST00000456112 HAPLN2-004 protein_coding Homo_sapiens 1e-36 158
ENST00000494218 HAPLN2-005 processed_transcript Homo_sapiens 0 597

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