C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 8459
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162504 Gm8459-001 ENSMUSG00000089931 10090 - 6:122566715-122567474 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderColonHeartLiverLungMuscleOvaryPlacentaENSMUST00000162504
Transcript ID Adipose Bladder Colon Heart Liver Lung Muscle Ovary Placenta
ENSMUST00000162504 0.083±0.03 0.012±0.00 0.324±0.08 0.054±0.00 0.113±0.10 0.129±0.04 0.059±0.00 0.155±0.09 0.036±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HL CIL_0008HL_0002 VISTA 6:122092605-122696323

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265333 VDAC1-002 protein_coding Homo_sapiens 0 424
ENST00000395044 VDAC1-003 protein_coding Homo_sapiens 0 424
ENST00000395047 VDAC1-001 protein_coding Homo_sapiens 0 424
ENST00000423609 VDAC1P2-001 processed_pseudogene Homo_sapiens 0 440
ENST00000425992 VDAC1-004 protein_coding Homo_sapiens 0 424
ENST00000430062 VDAC1P6-001 processed_pseudogene Homo_sapiens 0 359
ENST00000434069 VDAC1P3-001 processed_pseudogene Homo_sapiens 0 364
ENST00000439229 VDAC1P1-001 processed_pseudogene Homo_sapiens 0 377
ENST00000458323 VDAC1P11-001 processed_pseudogene Homo_sapiens 0 318
ENST00000466080 VDAC1-005 processed_transcript Homo_sapiens 0 296

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