C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: voltage-dependent anion channel 1 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000439229 VDAC1P1-001 ENSG00000073905 9606 + X:80929500-80930347 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastKidneyLiverLungMuscleOvaryPlacentaENST00000439229
Transcript ID Adipose Adrenal Breast Kidney Liver Lung Muscle Ovary Placenta
ENST00000439229 0.017±0.00 0.018±0.00 0.055±0.00 0.037±0.00 0.034±0.02 0.017±0.00 0.216±0.00 0.060±0.00 0.062±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003KC CIL_0003KC_0001 CGP X:80670854-81201942

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020673 Vdac1-005 protein_coding Mus_musculus 0 1009
ENSMUST00000102758 Vdac1-001 protein_coding Mus_musculus 0 1009
ENSMUST00000125694 Vdac1-003 nonsense_mediated_decay Mus_musculus 0 813
ENSMUST00000160955 Gm16102-001 processed_pseudogene Mus_musculus 0 399
ENSMUST00000162504 Gm8459-001 processed_pseudogene Mus_musculus 0 377
ENSMUST00000157052 Vdac1-002 processed_transcript Mus_musculus 0 342
ENSMUST00000118581 Gm15132-001 processed_pseudogene Mus_musculus 0 307

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