C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ataxin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162611 Atxn2-003 ENSMUSG00000042605 10090 + 5:121711337-121749183 processed_transcript

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TJ CIL_0008TJ_0002 VISTA 5:121625608-122227679

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000377617 ATXN2-001 protein_coding Homo_sapiens 0 412
ENST00000389153 ATXN2-002 protein_coding Homo_sapiens 0 412
ENST00000392645 ATXN2-003 retained_intron Homo_sapiens 0 414
ENST00000471866 ATXN2-007 retained_intron Homo_sapiens 5e-40 169
ENST00000483311 ATXN2-005 nonsense_mediated_decay Homo_sapiens 0 412
ENST00000535949 ATXN2-016 protein_coding Homo_sapiens 3e-38 165
ENST00000542287 ATXN2-011 protein_coding Homo_sapiens 0 494
ENST00000548492 ATXN2-018 protein_coding Homo_sapiens 0 265
ENST00000550104 ATXN2-201 protein_coding Homo_sapiens 0 412
ENST00000608853 ATXN2-025 protein_coding Homo_sapiens 0 412
ENST00000616825 ATXN2-202 protein_coding Homo_sapiens 4e-38 165

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