C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidylinositol glycan, class K
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000028906 pigk-001 ENSDARG00000024479 7955 + 2:8846226-8922838 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000028906
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000028906 2.629±1.52 2.269±0.70 2.973±0.83 0.211±0.00 0.596±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00048N CIL_00048N_0001 CGP 2:8630181-8922838
CIL_00048M CIL_00048M_0001 CGP 2:8846226-9044160

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003923 IEA GPI-anchor transamidase activity
GO:0004197 IEA cysteine-type endopeptidase activity
GO:0006508 IEA proteolysis
GO:0016255 IEA attachment of GPI anchor to protein
GO:0034394 IMP protein localization to cell surface
GO:0042765 IEA GPI-anchor transamidase complex
GO:0050976 IMP detection of mechanical stimulus involved in sensory perception of touch

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000045029 Pigk-002 protein_coding Mus_musculus 0 261
ENSMUST00000051510 Pigk-004 processed_transcript Mus_musculus 0.000000000004 77
ENSMUST00000159045 Pigk-008 processed_transcript Mus_musculus 2e-34 148
ENSMUST00000159899 Pigk-001 protein_coding Mus_musculus 0 523
ENSMUST00000161596 Pigk-005 nonsense_mediated_decay Mus_musculus 0 523
ENSMUST00000162642 Pigk-006 nonsense_mediated_decay Mus_musculus 0 523
ENSMUST00000162835 Pigk-003 retained_intron Mus_musculus 0 265

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