C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (RNA) mitochondrial (DNA directed)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162694 Polrmt-005 ENSMUSG00000020329 10090 - 10:79736174-79746571 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonOvaryPlacentaENSMUST00000162694
Transcript ID Colon Ovary Placenta
ENSMUST00000162694 2.313±0.00 1.867±0.00 1.637±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XG CIL_0008XG_0002 VISTA 10:79539861-80142369
CIL_0005ZK CIL_0005ZK_0003 CGP 10:79716634-79746581
CIL_0005ZL CIL_0005ZL_0003 CGP 10:79736123-79756961

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003899 IEA DNA-directed RNA polymerase activity
GO:0005739 IDA mitochondrion
GO:0006351 IEA transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000588649 POLRMT-001 protein_coding Homo_sapiens 0 963
ENST00000593183 AC005336.5-001 processed_pseudogene Homo_sapiens 0 322

Loading