C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: COMM domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162924 Commd1-006 ENSMUSG00000051355 10090 - 11:22900023-22972859 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000162924
Transcript ID Testis
ENSMUST00000162924 45.092±1.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BY CIL_0003BY_0002 CGP 11:22834744-22982090
CIL_0004OO CIL_0004OO_0002 CGP 11:22834747-22982382

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000311832 COMMD1-001 protein_coding Homo_sapiens 0 401
ENST00000445644 COMMD1-004 nonsense_mediated_decay Homo_sapiens 0 211
ENST00000455659 COMMD1-003 nonsense_mediated_decay Homo_sapiens 1.4013e-45 185
ENST00000471704 COMMD1-007 retained_intron Homo_sapiens 0 355
ENST00000472729 COMMD1-002 processed_transcript Homo_sapiens 0 399

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