C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: XPA binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000163038 Xab2-002 ENSMUSG00000019470 10090 - 8:3608421-3621305 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonKidneyLiverOvaryPlacentaENSMUST00000163038
Transcript ID Brain Colon Kidney Liver Ovary Placenta
ENSMUST00000163038 3.870±0.96 6.647±0.55 3.949±0.41 1.728±0.24 2.505±0.13 5.227±1.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043E CIL_00043E_0002 CGP 8:3587450-3621316
CIL_000438 CIL_000438_0002 CGP 8:3608421-3624231

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000160298 CAMSAP3-001 protein_coding Homo_sapiens 0 390
ENST00000358368 XAB2-001 protein_coding Homo_sapiens 0 1729
ENST00000446248 CAMSAP3-002 protein_coding Homo_sapiens 0 390
ENST00000595288 XAB2-002 retained_intron Homo_sapiens 0 907
ENST00000595692 CAMSAP3-003 retained_intron Homo_sapiens 0 390
ENST00000596134 XAB2-003 retained_intron Homo_sapiens 0 372
ENST00000600230 XAB2-004 retained_intron Homo_sapiens 0 621
ENST00000615537 CAMSAP3-201 protein_coding Homo_sapiens 0 390

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