C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00043E_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000076826-ENSG00000076924 CGP 9606 19:7595902-7629565
GeneTranscriptPositionBiotype
ENSG00000076826 (CAMSAP3)
calmodulin regulated spectrin-associated protein family, member 3
ENST00000160298 (CAMSAP3-001) 7595902-7618095 protein_coding
ENST00000446248 (CAMSAP3-002) 7595902-7618304 protein_coding
ENST00000593434 (CAMSAP3-004) 7616406-7617431 retained_intron
ENST00000595692 (CAMSAP3-003) 7614634-7618095 retained_intron
ENST00000615537 (CAMSAP3-201) 7595902-7618308 protein_coding
ENSG00000076924 (XAB2)
XPA binding protein 2
ENST00000358368 (XAB2-001) 7619525-7629565 protein_coding
ENST00000595288 (XAB2-002) 7619526-7628270 retained_intron
ENST00000596134 (XAB2-003) 7620893-7621533 retained_intron
ENST00000600230 (XAB2-004) 7620275-7621297 retained_intron
ENSG00000273657 (MIR6792)
microRNA 6792
ENST00000614460 (MIR6792-201) 7617439-7617505 miRNA
CIL_00043E_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000044433-ENSMUSG00000019470 CGP 10090 8:3587450-3621316
GeneTranscriptPositionBiotype
ENSMUSG00000019470 (Xab2)
XPA binding protein 2
ENSMUST00000019614 (Xab2-001) 3610087-3621316 protein_coding
ENSMUST00000159235 (Xab2-004) 3615995-3621282 nonsense_mediated_decay
ENSMUST00000159548 (Xab2-005) 3614317-3621270 protein_coding
ENSMUST00000159909 (Xab2-003) 3610090-3621302 retained_intron
ENSMUST00000163038 (Xab2-002) 3608421-3621305 retained_intron
ENSMUSG00000044433 (Camsap3)
calmodulin regulated spectrin-associated protein family, member 3
ENSMUST00000057028 (Camsap3-201) 3587450-3609074 protein_coding
ENSMUST00000171962 (Camsap3-202) 3587450-3609074 protein_coding
ENSMUSG00000084603 (Gm22204)
predicted gene, 22204
ENSMUST00000122654 (Gm22204-201) 3615529-3615855 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00043E_0001ENSG00000076826ENST00000160298ENST00000446248ENST00000593434ENST00000595692ENST00000615537ENSG00000076924ENST00000358368ENST00000595288ENST00000596134ENST00000600230ENSG00000273657ENST00000614460CIL_00043E_0002ENSMUSG00000019470ENSMUST00000019614ENSMUST00000159235ENSMUST00000159548ENSMUST00000159909ENSMUST00000163038ENSMUSG00000044433ENSMUST00000057028ENSMUST00000171962ENSMUSG00000084603ENSMUST00000122654
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00043E_0001ENSG00000076826ENST00000160298ENST00000446248ENST00000595692ENST00000615537ENSG00000076924ENST00000358368ENST00000600230ENSG00000273657ENST00000614460CIL_00043E_0002ENSMUSG00000019470ENSMUST00000019614ENSMUST00000159909ENSMUST00000163038ENSMUSG00000044433ENSMUST00000057028ENSMUST00000171962ENSMUSG00000084603ENSMUST00000122654
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000076826 ENST00000160298 0.020±0.00 N/A 0.520±0.00 1.521±1.15 0.541±0.03 N/A 0.179±0.00 4.332±3.32 0.262±0.00 0.748±0.00 N/A N/A 0.791±0.00 N/A
ENST00000446248 N/A N/A N/A 0.756±0.00 N/A N/A N/A N/A N/A N/A N/A 0.497±0.00 N/A N/A
ENST00000593434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595692 0.014±0.00 0.282±0.00 N/A N/A 0.249±0.00 0.950±0.00 N/A 0.799±0.00 N/A 1.099±0.00 N/A 9.218±0.00 0.253±0.00 5.655±0.00
ENST00000615537 N/A 0.238±0.00 0.175±0.00 0.706±0.19 N/A 1.210±0.03 0.104±0.00 N/A 9.183±0.00 N/A N/A 3.153±3.29 0.766±0.36 6.669±1.54
ENSG00000076924 ENST00000358368 19.661±0.00 26.292±0.00 3.258±0.00 9.729±5.11 10.272±7.26 12.838±8.73 4.386±2.02 18.329±0.00 5.097±0.57 12.315±7.21 14.868±11.01 24.943±17.84 25.696±4.25 45.246±7.90
ENST00000595288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596134 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600230 N/A N/A N/A N/A N/A N/A N/A N/A 3.151±0.00 N/A 2.671±0.00 N/A N/A N/A
ENSG00000273657 ENST00000614460 N/A N/A N/A N/A 1.275±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000019470 ENSMUST00000019614 29.873±6.62 17.906±9.58 26.453±6.88 21.725±4.92 23.946±5.59 20.514±2.47 10.852±2.00 16.035±1.05 17.271±8.81 29.492±1.88 5.104±0.52 42.290±11.55 26.215±6.85 28.509±5.20
ENSMUST00000159235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159909 N/A 3.942±0.45 N/A N/A 5.614±1.29 N/A 1.389±0.00 N/A N/A N/A 0.790±0.16 7.140±0.66 N/A N/A
ENSMUST00000163038 N/A N/A N/A 3.870±0.96 N/A 6.647±0.55 N/A 3.949±0.41 1.728±0.24 N/A N/A 2.505±0.13 5.227±1.16 N/A
ENSMUSG00000044433 ENSMUST00000057028 2.786±0.00 2.476±0.22 3.648±0.00 N/A 3.270±0.77 13.087±3.93 N/A 5.077±0.96 2.612±0.68 5.633±0.53 N/A 5.813±1.90 6.206±3.38 4.227±1.87
ENSMUST00000171962 N/A 2.538±0.36 N/A 4.217±0.90 2.583±0.08 8.569±2.70 N/A 3.612±0.76 1.431±0.07 4.537±0.00 N/A 2.785±0.38 4.432±1.85 4.365±0.00
ENSMUSG00000084603 ENSMUST00000122654 0.960±0.15 0.509±0.26 1.005±0.52 0.537±0.25 1.075±0.51 0.534±0.16 0.549±0.25 0.388±0.19 0.351±0.20 0.939±0.43 0.260±0.10 1.915±0.95 0.299±0.25 0.993±0.33

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