C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000163159 Adamts3-202 ENSMUSG00000043635 10090 - 5:89673841-89883334 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonKidneyLiverOvaryPlacentaTestisENSMUST00000163159
Transcript ID Adrenal Colon Kidney Liver Ovary Placenta Testis
ENSMUST00000163159 0.300±0.00 0.348±0.06 0.128±0.01 0.035±0.01 0.652±0.25 0.115±0.04 0.046±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000DB CIL_0000DB_0002 CGP 5:89527429-89883334
CIL_0000DC CIL_0000DC_0002 CGP 5:89673841-90224001

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004175 IEA endopeptidase activity
GO:0004222 IEA metalloendopeptidase activity
GO:0005515 IEA protein binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IEA extracellular space
GO:0006508 IEA proteolysis
GO:0008233 IDA peptidase activity
GO:0008270 IEA zinc ion binding
GO:0010573 IEA vascular endothelial growth factor production
GO:0016485 IDA protein processing
GO:0032964 IEA collagen biosynthetic process
GO:0070062 IEA extracellular vesicular exosome
GO:1900748 IEA positive regulation of vascular endothelial growth factor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000286657 ADAMTS3-001 protein_coding Homo_sapiens 0 3803
ENST00000505193 ADAMTS3-004 processed_transcript Homo_sapiens 0 470
ENST00000511274 ADAMTS3-005 processed_transcript Homo_sapiens 0 630
ENST00000622135 ADAMTS3-201 protein_coding Homo_sapiens 0 3797

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