C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADAM metallopeptidase with thrombospondin type 1 motif, 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000622135 ADAMTS3-201 ENSG00000156140 9606 - 4:72282041-72568796 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonOvaryENST00000622135
Transcript ID Breast Colon Ovary
ENST00000622135 0.120±0.00 0.134±0.00 0.226±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000DB CIL_0000DB_0001 CGP 4:72031804-72568799
CIL_0000DC CIL_0000DC_0001 CGP 4:72280969-73069755

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004175 IDA endopeptidase activity
GO:0004222 NAS:IEA metalloendopeptidase activity
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0005578 NAS proteinaceous extracellular matrix
GO:0005615 IDA extracellular space
GO:0006508 IEA proteolysis
GO:0008201 IEA heparin binding
GO:0008233 IEA peptidase activity
GO:0008270 NAS:IEA zinc ion binding
GO:0010573 IDA vascular endothelial growth factor production
GO:0016485 IDA protein processing
GO:0030198 TAS extracellular matrix organization
GO:0030199 IC collagen fibril organization
GO:0030574 NAS collagen catabolic process
GO:0031012 TAS:IEA extracellular matrix
GO:0032964 IDA collagen biosynthetic process
GO:0043206 IC extracellular fibril organization
GO:0070062 IDA extracellular vesicular exosome
GO:1900748 IDA positive regulation of vascular endothelial growth factor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000061427 Adamts3-201 protein_coding Mus_musculus 0 4017
ENSMUST00000163159 Adamts3-202 protein_coding Mus_musculus 0 3797

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