C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000163265 Arhgap19-201 ENSMUSG00000025154 10090 - 19:41766591-41802084 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLiverMuscleOvaryPlacentaENSMUST00000163265
Transcript ID Adrenal Breast Colon Heart Kidney Liver Muscle Ovary Placenta
ENSMUST00000163265 0.998±0.09 1.378±0.66 1.047±0.26 0.169±0.00 0.510±0.00 0.774±0.21 0.933±0.82 3.483±1.91 0.188±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SO CIL_0008SO_0002 VISTA 19:41258217-41859329
CIL_0003F3 CIL_0003F3_0002 CGP 19:41600257-41802084

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358308 ARHGAP19-201 protein_coding Homo_sapiens 0 1037
ENST00000358531 ARHGAP19-003 protein_coding Homo_sapiens 0 1543
ENST00000371027 ARHGAP19-002 protein_coding Homo_sapiens 0 1487
ENST00000479633 ARHGAP19-SLIT1-001 nonsense_mediated_decay Homo_sapiens 0 1543
ENST00000492211 ARHGAP19-004 nonsense_mediated_decay Homo_sapiens 0 1020
ENST00000493068 ARHGAP19-007 retained_intron Homo_sapiens 0 412

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