C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neural precursor cell expressed, developmentally down-regulated gene 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000163623 Nedd9-202 ENSMUSG00000021365 10090 - 13:41309916-41359001 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000163623
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000163623 12.047±2.52 5.943±0.68 5.908±1.12 3.674±1.93 5.806±0.77 31.073±2.26 4.522±0.40 9.621±2.66 1.236±1.37 28.536±2.76 1.404±0.29 12.839±2.09 4.788±3.27 0.984±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000385 CIL_000385_0002 CGP 13:41309916-41641347

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000922 IDA spindle pole
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0007067 IEA mitotic nuclear division
GO:0007155 IEA cell adhesion
GO:0040008 IEA regulation of growth

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000379446 NEDD9-001 protein_coding Homo_sapiens 0 2820
ENST00000448183 NEDD9-008 nonsense_mediated_decay Homo_sapiens 0 2333
ENST00000504387 NEDD9-002 protein_coding Homo_sapiens 0 2739
ENST00000505589 NEDD9-015 retained_intron Homo_sapiens 0 399
ENST00000620854 NEDD9-201 protein_coding Homo_sapiens 0 2337

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