C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neural precursor cell expressed, developmentally down-regulated 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000504387 NEDD9-002 ENSG00000111859 9606 - 6:11184818-11382348 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalLungMuscleOvaryPlacentaENST00000504387
Transcript ID Adipose Adrenal Lung Muscle Ovary Placenta
ENST00000504387 15.695±0.00 5.223±0.00 54.718±0.00 3.101±0.00 6.146±0.00 12.200±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000385 CIL_000385_0001 CGP 6:11183298-11583524

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005737 TAS cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0005819 TAS spindle
GO:0007010 NAS cytoskeleton organization
GO:0007067 IEA mitotic nuclear division
GO:0007155 IEA cell adhesion
GO:0007165 TAS signal transduction
GO:0007229 NAS integrin-mediated signaling pathway
GO:0030054 IEA cell junction
GO:0040008 IEA regulation of growth
GO:0042995 IEA cell projection
GO:0051017 NAS actin filament bundle assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021794 Nedd9-201 protein_coding Mus_musculus 0 2750
ENSMUST00000163623 Nedd9-202 protein_coding Mus_musculus 0 2739

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