C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: patatin-like phospholipase domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164016 Pnpla2-001 ENSMUSG00000025509 10090 + 7:141455198-141460743 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartLiverLungOvaryENSMUST00000164016
Transcript ID Adipose Adrenal Breast Colon Heart Liver Lung Ovary
ENSMUST00000164016 66.328±1.01 59.387±23.80 108.075±5.14 10.788±0.22 16.707±0.00 0.899±0.26 31.804±9.06 10.816±3.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003EM CIL_0003EM_0002 CGP 7:141447370-141460743
CIL_0003EN CIL_0003EN_0002 CGP 7:141455198-141466613

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004806 IDA triglyceride lipase activity
GO:0005515 IPI protein binding
GO:0005811 IDA lipid particle
GO:0005829 IDA cytosol
GO:0005886 IEA plasma membrane
GO:0010891 IDA negative regulation of sequestering of triglyceride
GO:0010898 IDA positive regulation of triglyceride catabolic process
GO:0016021 IEA integral component of membrane
GO:0019433 IEA triglyceride catabolic process
GO:0019915 IMP lipid storage
GO:0034389 IMP lipid particle organization
GO:0043231 IEA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336615 PNPLA2-001 protein_coding Homo_sapiens 0 1373
ENST00000525250 PNPLA2-002 retained_intron Homo_sapiens 0 625
ENST00000531923 PNPLA2-007 retained_intron Homo_sapiens 0 327
ENST00000617551 PNPLA2-201 protein_coding Homo_sapiens 0 625

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