C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAS, guanyl releasing protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164192 Rasgrp3-202 ENSMUSG00000071042 10090 + 17:75435905-75529043 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000164192
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000164192 2.007±0.73 2.083±0.46 1.010±0.03 1.151±0.05 2.950±1.72 0.830±0.00 3.273±0.34 2.296±0.32 0.909±0.32 9.264±1.50 4.670±1.35 1.506±0.89 2.496±0.86 0.116±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000MZ CIL_0000MZ_0002 CGP 17:75005568-75529043
CIL_0003TB CIL_0003TB_0003 CGP 17:75435905-75551946

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005088 IDA Ras guanyl-nucleotide exchange factor activity
GO:0005509 IEA calcium ion binding
GO:0005737 IDA cytoplasm
GO:0007265 IDA Ras protein signal transduction
GO:0017016 IDA Ras GTPase binding
GO:0019900 IPI kinase binding
GO:0032045 IDA guanyl-nucleotide exchange factor complex
GO:0032854 IEA positive regulation of Rap GTPase activity
GO:0043087 IDA regulation of GTPase activity
GO:0046582 IEA Rap GTPase activator activity
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000402538 RASGRP3-001 protein_coding Homo_sapiens 0 2697
ENST00000403687 RASGRP3-006 protein_coding Homo_sapiens 0 2697
ENST00000407811 RASGRP3-004 protein_coding Homo_sapiens 0 2676
ENST00000419772 RASGRP3-019 nonsense_mediated_decay Homo_sapiens 0 527
ENST00000423159 RASGRP3-013 protein_coding Homo_sapiens 0 483
ENST00000425210 RASGRP3-008 protein_coding Homo_sapiens 4e-39 165
ENST00000437184 RASGRP3-007 protein_coding Homo_sapiens 0 730
ENST00000442390 RASGRP3-012 protein_coding Homo_sapiens 0 309
ENST00000444784 RASGRP3-014 protein_coding Homo_sapiens 0 477
ENST00000477927 RASGRP3-018 processed_transcript Homo_sapiens 0 556
ENST00000479528 RASGRP3-010 retained_intron Homo_sapiens 0 255
ENST00000482857 RASGRP3-011 retained_intron Homo_sapiens 0 255
ENST00000490150 RASGRP3-017 retained_intron Homo_sapiens 0 562

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