C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: casein kinase 1, alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164253 Csnk1a1-010 ENSMUSG00000024576 10090 + 18:61575517-61582118 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000851 CIL_000851_0002 VISTA 18:61337492-61938739
CIL_0007ZC CIL_0007ZC_0002 VISTA 18:61351102-61954077

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000130655 csnk1a1-204 protein_coding Danio_rerio 0 490
ENSDART00000121429 csnk1a1-203 protein_coding Danio_rerio 0 490
ENSDART00000052520 csnk1a1-202 protein_coding Danio_rerio 0 490
ENSDART00000009443 csnk1a1-201 protein_coding Danio_rerio 0 490
ENST00000261798 CSNK1A1-001 protein_coding Homo_sapiens 0 647
ENST00000377843 CSNK1A1-201 protein_coding Homo_sapiens 0 715
ENST00000379800 CSNK1A1L-001 protein_coding Homo_sapiens 0 641
ENST00000503350 CSNK1A1-006 protein_coding Homo_sapiens 0 715
ENST00000504105 CSNK1A1P3-001 processed_pseudogene Homo_sapiens 0 307
ENST00000504676 CSNK1A1-002 protein_coding Homo_sapiens 0 647
ENST00000515435 CSNK1A1-004 protein_coding Homo_sapiens 0 647
ENST00000515768 CSNK1A1-003 protein_coding Homo_sapiens 0 715
ENST00000546014 AP000619.6-001 processed_pseudogene Homo_sapiens 0 475
ENST00000563423 CSNK1A1P1-001 transcribed_processed_pseudogene Homo_sapiens 0 520
ENST00000606299 CSNK1A1-009 protein_coding Homo_sapiens 0 542
ENST00000606719 CSNK1A1-008 protein_coding Homo_sapiens 0 715
ENST00000606826 CSNK1A1-010 nonsense_mediated_decay Homo_sapiens 0 713

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