C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: casein kinase 1, alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000130655 csnk1a1-204 ENSDARG00000052674 7955 - 14:40259435-40280071 protein_coding

Danio rerio EnsemblZv9

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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000130655
Transcript ID Brain Heart Kidney Muscle
ENSDART00000130655 8.104±1.86 14.997±11.81 10.612±7.35 3.557±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0004672 IEA protein kinase activity
GO:0004674 IEA protein serine/threonine kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006468 IEA protein phosphorylation
GO:0007507 IMP heart development
GO:0016301 IEA kinase activity
GO:0016310 IEA phosphorylation
GO:0016740 IEA transferase activity
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0018105 IDA peptidyl-serine phosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000009138 Stk38-001 protein_coding Mus_musculus 0.00002 57
ENSMUST00000119274 Stk38-002 protein_coding Mus_musculus 0.00001 57
ENSMUST00000126893 Stk38-003 processed_transcript Mus_musculus 0.000008 57
ENSMUST00000141431 Stk38-009 retained_intron Mus_musculus 0.000004 57
ENSMUST00000144299 Stk38-008 retained_intron Mus_musculus 0.000005 57
ENSMUST00000163205 Csnk1a1-005 protein_coding Mus_musculus 0 961
ENSMUST00000164253 Csnk1a1-010 protein_coding Mus_musculus 0 490
ENSMUST00000165721 Csnk1a1-002 protein_coding Mus_musculus 0 977
ENSMUST00000166990 Csnk1a1-004 protein_coding Mus_musculus 0 941
ENSMUST00000170862 Csnk1a1-007 protein_coding Mus_musculus 0 621
ENST00000377843 CSNK1A1-201 protein_coding Homo_sapiens 0 924
ENST00000503350 CSNK1A1-006 protein_coding Homo_sapiens 0 518
ENST00000515768 CSNK1A1-003 protein_coding Homo_sapiens 0 586
ENST00000606299 CSNK1A1-009 protein_coding Homo_sapiens 0 361
ENST00000606719 CSNK1A1-008 protein_coding Homo_sapiens 0 608
ENST00000606826 CSNK1A1-010 nonsense_mediated_decay Homo_sapiens 0 470

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