C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: casein kinase 1, alpha 1 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000563423 CSNK1A1P1-001 ENSG00000223518 9606 - 15:36817133-36818113 transcribed_processed_pseudogene

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006HI CIL_0006HI_0001 CGP 15:35217345-36810248
CIL_0007MM CIL_0007MM_0001 UCNEbase 15:35253766-37880700
CIL_0008V8 CIL_0008V8_0001 VISTA 15:36226820-36828494
CIL_00088L CIL_00088L_0001 VISTA 15:36372618-36973897
CIL_0008GX CIL_0008GX_0001 VISTA 15:36373931-36975330
CIL_00084J CIL_00084J_0001 VISTA 15:36391617-36991995
CIL_0006QS CIL_0006QS_0001 CGP 15:36579611-37101299
CIL_00087U CIL_00087U_0001 VISTA 15:36595901-37198492
CIL_0008KD CIL_0008KD_0001 VISTA 15:36599207-37200420
CIL_0008O9 CIL_0008O9_0001 VISTA 15:36624792-37227400
CIL_0008M1 CIL_0008M1_0001 VISTA 15:36648604-37250297
CIL_00096Q CIL_00096Q_0001 VISTA 15:36695888-37296972
CIL_0009D1 CIL_0009D1_0001 VISTA 15:36755403-37357754
CIL_00086F CIL_00086F_0001 VISTA 15:36779528-37380936

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000165721 Csnk1a1-002 protein_coding Mus_musculus 0 1146
ENSMUST00000163205 Csnk1a1-005 protein_coding Mus_musculus 0 1136
ENSMUST00000166990 Csnk1a1-004 protein_coding Mus_musculus 0 1116
ENSMUST00000115246 Csnk1a1-003 protein_coding Mus_musculus 0 1086
ENSMUST00000165123 Csnk1a1-001 protein_coding Mus_musculus 0 1085
ENSMUST00000170862 Csnk1a1-007 protein_coding Mus_musculus 0 689
ENSMUST00000167187 Csnk1a1-009 protein_coding Mus_musculus 0 628
ENSMUST00000164253 Csnk1a1-010 protein_coding Mus_musculus 0 520

Loading