C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: growth factor independent 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164290 Gfi1b-201 ENSMUSG00000026815 10090 - 2:28609450-28621982 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000164290
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000164290 0.120±0.09 0.050±0.03 0.059±0.00 0.045±0.03 0.324±0.08 0.173±0.06 0.025±0.00 0.032±0.00 15.676±6.83 0.126±0.04 0.090±0.01 0.807±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000H4 CIL_0000H4_0002 CGP 2:28609450-28691167

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001085 IEA RNA polymerase II transcription factor binding
GO:0003676 IEA nucleic acid binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005667 IEA transcription factor complex
GO:0016363 IEA nuclear matrix
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000074683 EVI5L-201 protein_coding Danio_rerio 0 213
ENST00000294702 GFI1-002 protein_coding Homo_sapiens 0 342
ENST00000339463 GFI1B-003 protein_coding Homo_sapiens 0 507
ENST00000341976 ZNF70-001 protein_coding Homo_sapiens 0.00000000000009 84
ENST00000370332 GFI1-001 protein_coding Homo_sapiens 0 342
ENST00000372122 GFI1B-002 protein_coding Homo_sapiens 0 507
ENST00000372123 GFI1B-001 protein_coding Homo_sapiens 0 505
ENST00000427103 GFI1-201 protein_coding Homo_sapiens 0 342
ENST00000534944 GFI1B-201 protein_coding Homo_sapiens 0 505

Loading