C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial ribosomal protein L13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164542 Mrpl13-003 ENSMUSG00000022370 10090 - 15:55534094-55557349 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000164542
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000164542 6.224±0.87 2.295±0.76 14.245±2.88 32.502±22.63 5.106±1.83 2.533±0.40 9.766±0.44 8.142±1.02 7.081±0.90 4.670±1.07 16.472±1.77 21.418±27.86 19.743±15.94 57.512±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00009J CIL_00009J_0003 CGP 15:55307750-55557748
CIL_00008U CIL_00008U_0003 CGP 15:55534094-55626423

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005739 IDA mitochondrion
GO:0005762 ISO mitochondrial large ribosomal subunit
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306185 MRPL13-001 protein_coding Homo_sapiens 9.99967e-42 174
ENST00000518696 MRPL13-003 nonsense_mediated_decay Homo_sapiens 0 497
ENST00000520677 MRPL13-004 retained_intron Homo_sapiens 0 344

Loading