C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-like modifier activating enzyme 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164744 Uba3-202 ENSMUSG00000030061 10090 - 6:97183670-97205560 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000164744
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000164744 11.735±4.18 4.299±0.71 4.196±0.00 7.857±5.59 7.186±1.23 3.893±1.50 8.157±1.27 6.398±0.95 2.738±1.08 8.022±1.20 6.553±1.62 3.553±0.00 2.933±0.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001TD CIL_0001TD_0003 CGP 6:97155266-97205642
CIL_00034O CIL_00034O_0002 CGP 6:97183670-97233315

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 IMP mitotic cell cycle
GO:0005524 IEA ATP binding
GO:0005634 IBA nucleus
GO:0005829 IBA cytosol
GO:0007113 IMP endomitotic cell cycle
GO:0016881 IEA acid-amino acid ligase activity
GO:0019781 IBA NEDD8 activating enzyme activity
GO:0045116 IBA protein neddylation
GO:0051726 IMP regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000349511 UBA3-002 protein_coding Homo_sapiens 0 1951
ENST00000361055 UBA3-001 protein_coding Homo_sapiens 0 1901
ENST00000415609 UBA3-006 protein_coding Homo_sapiens 0 1561
ENST00000461522 UBA3-009 retained_intron Homo_sapiens 0 645
ENST00000461934 UBA3-007 nonsense_mediated_decay Homo_sapiens 0 1260
ENST00000465108 UBA3-003 retained_intron Homo_sapiens 0 468
ENST00000465627 UBA3-010 nonsense_mediated_decay Homo_sapiens 0 1260
ENST00000466763 UBA3-004 retained_intron Homo_sapiens 0 342
ENST00000485424 UBA3-008 retained_intron Homo_sapiens 0 207
ENST00000493957 UBA3-005 retained_intron Homo_sapiens 0 392

Loading