C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adenylosuccinate lyase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164806 Adsl-003 ENSMUSG00000022407 10090 + 15:80948548-80968748 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000164806
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000164806 14.284±3.95 5.404±0.90 13.807±3.37 11.318±1.25 10.237±6.53 9.879±4.23 19.812±3.89 10.895±3.38 11.595±8.47 10.336±3.11 28.942±7.92 16.755±4.94 13.739±9.50 8.564±0.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006F2 CIL_0006F2_0002 CGP 15:80711319-80970947

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004018 ISA N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
GO:0005739 IDA mitochondrion
GO:0006167 ISA AMP biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216194 ADSL-017 protein_coding Homo_sapiens 0 1000
ENST00000342312 ADSL-002 protein_coding Homo_sapiens 0 1458
ENST00000466863 ADSL-003 retained_intron Homo_sapiens 0 359
ENST00000477111 ADSL-005 retained_intron Homo_sapiens 0 359
ENST00000623063 ADSL-001 protein_coding Homo_sapiens 0 1415
ENST00000623287 ADSL-012 nonsense_mediated_decay Homo_sapiens 0 597
ENST00000623632 ADSL-010 protein_coding Homo_sapiens 0 536
ENST00000623978 ADSL-011 protein_coding Homo_sapiens 0 732
ENST00000624474 ADSL-013 nonsense_mediated_decay Homo_sapiens 0 416
ENST00000624503 ADSL-007 nonsense_mediated_decay Homo_sapiens 0 359
ENST00000625194 ADSL-014 protein_coding Homo_sapiens 0 737

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