C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1600012H06 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164837 1600012H06Rik-001 ENSMUSG00000050088 10090 + 17:14943230-14945934 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainLiverMuscleOvaryPlacentaENSMUST00000164837
Transcript ID Adipose Adrenal Bladder Brain Liver Muscle Ovary Placenta
ENSMUST00000164837 2.230±0.00 9.424±0.00 6.296±0.00 4.822±0.00 3.567±0.00 2.187±0.05 9.926±2.23 3.661±0.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004W2 CIL_0004W2_0002 CGP 17:14829331-14959570
CIL_0004W9 CIL_0004W9_0002 CGP 17:14943184-14961273

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0006915 IEA apoptotic process
GO:0008150 ND biological_process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000332290 C6orf120-001 protein_coding Homo_sapiens 0 207
ENST00000339209 PHF10-001 protein_coding Homo_sapiens 6e-37 159
ENST00000366780 PHF10-002 protein_coding Homo_sapiens 6e-37 159
ENST00000621772 PHF10-202 protein_coding Homo_sapiens 6e-37 159

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