C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | PHD finger protein 10 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000621772  |
PHF10-202 |
ENSG00000130024 |
9606 | - |
6:169703908-169725566  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004W2 | CIL_0004W2_0001 | CGP | 6:169457212-169704856 |
| CIL_0004W9 | CIL_0004W9_0001 | CGP | 6:169702190-169725566 |
| CIL_0004WA | CIL_0004WA_0001 | CGP | 6:169703905-169751559 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IEA | protein binding |
| GO:0006351 | IEA | transcription, DNA-templated |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
| GO:0007399 | IEA | nervous system development |
| GO:0008270 | IEA | zinc ion binding |
| GO:0071564 | ISS | npBAF complex |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000024657
|
Phf10-001 | protein_coding | Mus_musculus | 0 | 1978 |
|
ENSMUST00000168938
|
Phf10-002 | nonsense_mediated_decay | Mus_musculus | 0 | 800 |
|
ENSMUST00000171526
|
Phf10-005 | retained_intron | Mus_musculus | 0 | 649 |
|
ENSMUST00000172054
|
Phf10-004 | retained_intron | Mus_musculus | 0 | 486 |
|
ENSMUST00000167805
|
Phf10-003 | retained_intron | Mus_musculus | 0 | 424 |
|
ENSMUST00000174163
|
1600012H06Rik-004 | processed_transcript | Mus_musculus | 1.99965e-42 | 178 |
|
ENSMUST00000164837
|
1600012H06Rik-001 | protein_coding | Mus_musculus | 6e-37 | 159 |
|
ENSMUST00000052691
|
1600012H06Rik-003 | protein_coding | Mus_musculus | 6e-37 | 159 |
