C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 78
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164932 Krt78-201 ENSMUSG00000050463 10090 - 15:101946004-101954287 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000164932
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000164932 0.035±0.02 0.024±0.00 0.485±0.13 0.013±0.00 0.371±0.11 0.119±0.05 0.012±0.00 0.018±0.01 0.005±0.00 9.172±9.28 0.038±0.02 0.083±0.04 0.313±0.35 0.477±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006TA CIL_0006TA_0002 CGP 15:101929332-101954287
CIL_00038V CIL_00038V_0002 CGP 15:101946004-102004342

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005198 IEA structural molecule activity
GO:0005615 IEA extracellular space
GO:0008150 ND biological_process
GO:0045095 IEA keratin filament
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000081223 krt5-201 protein_coding Danio_rerio 2e-19 102
ENSDART00000129044 krt5-001 protein_coding Danio_rerio 2e-19 102
ENST00000267119 KRT71-001 protein_coding Homo_sapiens 5e-34 150
ENST00000304620 KRT78-001 protein_coding Homo_sapiens 0 987
ENST00000305620 KRT74-001 protein_coding Homo_sapiens 2.00386e-43 182
ENST00000546384 KRT74-002 retained_intron Homo_sapiens 3e-36 156
ENST00000549343 KRT74-003 protein_coding Homo_sapiens 1e-35 156
ENST00000620027 KRT123P-001 transcribed_unprocessed_pseudogene Homo_sapiens 0.0000000000001 82

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