C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 74
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000549343 KRT74-003 ENSG00000170484 9606 - 12:52565782-52573816 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENST00000549343
Transcript ID Ovary
ENST00000549343 0.007±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033Q CIL_00033Q_0005 CGP 12:52543909-52573825
CIL_00033Q CIL_00033Q_000D CGP 12:52565782-52601538

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005882 IEA intermediate filament
GO:0045095 IEA keratin filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000088018 Krt74-201 protein_coding Mus_musculus 0 928
ENSMUST00000023710 Krt71-001 protein_coding Mus_musculus 0 861
ENSMUST00000063292 Krt73-001 protein_coding Mus_musculus 0 813
ENSMUST00000071104 Krt72-001 protein_coding Mus_musculus 0 654
ENSMUST00000042957 Krt75-001 protein_coding Mus_musculus 0 237
ENSMUST00000023712 Krt2-001 protein_coding Mus_musculus 0 195
ENSMUST00000023797 Krt4-201 protein_coding Mus_musculus 2e-38 165
ENSMUST00000023952 Krt8-201 protein_coding Mus_musculus 4e-36 158
ENSMUST00000164932 Krt78-201 protein_coding Mus_musculus 1e-35 156
ENSMUST00000131069 Krt7-002 retained_intron Mus_musculus 2e-33 148
ENSMUST00000068904 Krt7-001 protein_coding Mus_musculus 2e-33 148
ENSMUST00000179022 Lmnb2-201 protein_coding Mus_musculus 0.00000000000002 86
ENSMUST00000105332 Lmnb2-002 protein_coding Mus_musculus 0.00000000000002 86
ENSMUST00000057623 Lmnb2-001 protein_coding Mus_musculus 0.00000000000002 86

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