C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-conjugating enzyme E2D 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166033 Ube2d3-202 ENSMUSG00000078578 10090 + 3:135438759-135467178 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000166033
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000166033 14.887±7.47 55.457±1.59 27.398±2.99 36.460±3.51 29.031±16.01 28.244±5.21 20.176±2.41 20.083±11.66 21.401±2.80 34.018±9.36 33.352±11.03 27.393±13.01 16.457±9.29 0.545±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000209 ISS protein polyubiquitination
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005768 IEA endosome
GO:0005886 IEA plasma membrane
GO:0006281 IEA DNA repair
GO:0006513 IEA protein monoubiquitination
GO:0006915 IEA apoptotic process
GO:0016567 IEA protein ubiquitination
GO:0016881 IEA acid-amino acid ligase activity
GO:0043161 ISS proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0070062 IEA extracellular vesicular exosome
GO:0070936 ISS protein K48-linked ubiquitination
GO:0070979 ISS protein K11-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253815 UBE2D2-201 protein_coding Homo_sapiens 0 503
ENST00000321805 UBE2D3-013 protein_coding Homo_sapiens 0 1247
ENST00000338145 UBE2D3-006 protein_coding Homo_sapiens 0 1216
ENST00000343106 UBE2D3-002 protein_coding Homo_sapiens 0 2087
ENST00000349311 UBE2D3-012 protein_coding Homo_sapiens 0 1194
ENST00000350435 UBE2D3-014 protein_coding Homo_sapiens 0 1042
ENST00000357194 UBE2D3-003 protein_coding Homo_sapiens 0 839
ENST00000394801 UBE2D3-004 protein_coding Homo_sapiens 0 3158
ENST00000394803 UBE2D3-005 protein_coding Homo_sapiens 0 3158
ENST00000394804 UBE2D3-201 protein_coding Homo_sapiens 0 3439
ENST00000398733 UBE2D2-001 protein_coding Homo_sapiens 0 507
ENST00000398734 UBE2D2-004 nonsense_mediated_decay Homo_sapiens 0 507
ENST00000424409 UBE2D3P2-001 processed_pseudogene Homo_sapiens 0 640
ENST00000426992 UBE2D3P3-001 processed_pseudogene Homo_sapiens 2e-36 156
ENST00000436669 UBE2D3P1-001 processed_pseudogene Homo_sapiens 0 726
ENST00000453744 UBE2D3-001 protein_coding Homo_sapiens 0 3618
ENST00000502404 UBE2D3-017 protein_coding Homo_sapiens 0 763
ENST00000502563 UBE2D3-027 nonsense_mediated_decay Homo_sapiens 0 575
ENST00000502690 UBE2D3-011 protein_coding Homo_sapiens 0 556
ENST00000503282 UBE2D3-025 retained_intron Homo_sapiens 0 508
ENST00000503418 UBE2D3-021 nonsense_mediated_decay Homo_sapiens 0 351
ENST00000503742 UBE2D3-007 retained_intron Homo_sapiens 0 883
ENST00000504211 UBE2D3-019 protein_coding Homo_sapiens 0 911
ENST00000505007 UBE2D2-003 protein_coding Homo_sapiens 0 420
ENST00000505009 UBE2D3-031 retained_intron Homo_sapiens 0 676
ENST00000505207 UBE2D3-015 protein_coding Homo_sapiens 0 822
ENST00000505307 UBE2D3-022 nonsense_mediated_decay Homo_sapiens 0 532
ENST00000505548 UBE2D2-002 protein_coding Homo_sapiens 0 507
ENST00000507845 UBE2D3-016 protein_coding Homo_sapiens 0 789
ENST00000508238 UBE2D3-009 protein_coding Homo_sapiens 0 616
ENST00000508249 UBE2D3-010 protein_coding Homo_sapiens 0 394
ENST00000508474 UBE2D3-008 retained_intron Homo_sapiens 0 2743
ENST00000508476 UBE2D3-018 protein_coding Homo_sapiens 0 486
ENST00000508635 UBE2D3-024 nonsense_mediated_decay Homo_sapiens 0 590
ENST00000508818 UBE2D3-029 retained_intron Homo_sapiens 0 490
ENST00000508974 UBE2D3-026 nonsense_mediated_decay Homo_sapiens 0 475
ENST00000510129 UBE2D3-028 nonsense_mediated_decay Homo_sapiens 0 804
ENST00000510599 UBE2D3-030 retained_intron Homo_sapiens 0 311
ENST00000511691 UBE2D2-008 retained_intron Homo_sapiens 0 411
ENST00000511725 UBE2D2-006 protein_coding Homo_sapiens 0 503
ENST00000513098 UBE2D3-023 processed_transcript Homo_sapiens 0 351
ENST00000514755 UBE2D3-020 nonsense_mediated_decay Homo_sapiens 0 351
ENST00000556081 CTD-2298J14.1-001 processed_pseudogene Homo_sapiens 0 324
ENST00000618836 UBE2D3-202 protein_coding Homo_sapiens 0 3260

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