C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-conjugating enzyme E2D 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000253815 UBE2D2-201 ENSG00000131508 9606 + 5:139599562-139626801 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000253815
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000253815 10.255±0.00 20.384±0.00 9.036±0.00 16.009±0.00 14.326±5.27 13.000±0.00 18.132±6.02 17.357±2.19 26.437±4.03 42.326±37.93 29.111±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000548 CIL_000548_0001 CGP 5:139475534-139628433
CIL_000549 CIL_000549_0001 CGP 5:139526431-139683882

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008152 IEA metabolic process
GO:0016881 IEA acid-amino acid ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000170693 Ube2d2a-202 protein_coding Mus_musculus 0 712
ENSMUST00000167406 Ube2d2a-201 protein_coding Mus_musculus 0 712
ENSMUST00000036976 Gm9762-201 processed_pseudogene Mus_musculus 0 706
ENSMUST00000072578 Ube2d2b-001 protein_coding Mus_musculus 0 592
ENSMUST00000166033 Ube2d3-202 protein_coding Mus_musculus 0 503
ENSMUST00000106291 Ube2d3-201 protein_coding Mus_musculus 0 503
ENSMUST00000117197 Gm4596-001 processed_pseudogene Mus_musculus 0 472
ENSMUST00000119320 Gm15361-001 processed_pseudogene Mus_musculus 0 446
ENSDART00000049285 ube2d2l-001 protein_coding Danio_rerio 0 431
ENSMUST00000117500 Gm13331-001 processed_pseudogene Mus_musculus 0 418
ENSMUST00000132484 Spopl-001 protein_coding Mus_musculus 0 418
ENSDART00000063837 ube2d2-201 protein_coding Danio_rerio 0 357

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