C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 38, member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166223 Slc38a4-202 ENSMUSG00000022464 10090 - 15:96996765-97020322 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000166223
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000166223 0.258±0.08 1.020±0.39 0.698±0.00 0.558±0.38 4.075±2.02 0.230±0.08 2.158±0.43 0.555±0.22 101.977±73.23 1.519±0.25 15.027±1.82 0.974±0.50 152.792±94.29 0.512±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YP CIL_0005YP_0002 CGP 15:96994823-97247287

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 IEA plasma membrane
GO:0006814 IEA sodium ion transport
GO:0015293 IEA symporter activity
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000266579 SLC38A4-002 protein_coding Homo_sapiens 0 1471
ENST00000440085 SLC38A5-004 protein_coding Homo_sapiens 0.0000000006 69
ENST00000447411 SLC38A4-001 protein_coding Homo_sapiens 0 1471
ENST00000494034 SLC38A5-008 nonsense_mediated_decay Homo_sapiens 0.0000000003 69
ENST00000546940 SLC38A4-003 protein_coding Homo_sapiens 0 599
ENST00000547477 SLC38A4-004 protein_coding Homo_sapiens 0 680
ENST00000550670 SLC38A4-005 protein_coding Homo_sapiens 9e-30 134
ENST00000595796 SLC38A5-011 protein_coding Homo_sapiens 0.000000002 69
ENST00000619100 SLC38A5-012 protein_coding Homo_sapiens 0.000000001 69
ENST00000620913 SLC38A5-201 protein_coding Homo_sapiens 0.000000001 69
ENST00000622196 SLC38A5-202 protein_coding Homo_sapiens 0.000000001 69

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