C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 38, member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000619100 SLC38A5-012 ENSG00000017483 9606 - X:48458539-48467493 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLiverLungOvaryPlacentaENST00000619100
Transcript ID Breast Colon Liver Lung Ovary Placenta
ENST00000619100 0.169±0.00 0.137±0.00 0.330±0.00 2.478±2.25 0.336±0.17 0.404±0.17

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 TAS plasma membrane
GO:0006811 TAS ion transport
GO:0006865 TAS amino acid transport
GO:0016021 IEA integral component of membrane
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115590 Slc38a5-003 protein_coding Mus_musculus 0 1445
ENSMUST00000033512 Slc38a5-001 protein_coding Mus_musculus 0 1445
ENSMUST00000115591 Slc38a5-002 protein_coding Mus_musculus 0 1445
ENSMUST00000127103 Slc38a5-004 protein_coding Mus_musculus 0 230
ENSMUST00000166223 Slc38a4-202 protein_coding Mus_musculus 0.000000001 69
ENSMUST00000023101 Slc38a4-201 protein_coding Mus_musculus 0.000000001 69

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