C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gametogenetin binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166425 Ggnbp2-009 ENSMUSG00000020530 10090 - 11:84860719-84870491 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000166425
Transcript ID Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000166425 12.734±0.00 11.088±1.12 10.399±0.00 14.879±2.18 12.826±1.55 16.458±2.13 13.168±3.22 85.858±0.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007YB CIL_0007YB_0004 VISTA 11:84425827-85026602
CIL_00085R CIL_00085R_0002 VISTA 11:84466073-85066769

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000611219 GGNBP2-004 protein_coding Homo_sapiens 0 313
ENST00000613102 GGNBP2-001 protein_coding Homo_sapiens 0 544
ENST00000616019 GGNBP2-006 protein_coding Homo_sapiens 0 536
ENST00000617860 GGNBP2-003 retained_intron Homo_sapiens 0 544
ENST00000618837 GGNBP2-002 retained_intron Homo_sapiens 0 544
ENST00000621686 GGNBP2-201 protein_coding Homo_sapiens 0 544

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