C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: gametogenetin binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000617860 GGNBP2-003 ENSG00000278311 9606 + 17:36544919-36582477 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085R CIL_00085R_0001 VISTA 17:36355391-36956100
CIL_0007YB CIL_0007YB_0001 VISTA 17:36401446-37002205
CIL_0007YB CIL_0007YB_0003 VISTA 17:36402232-37002285
CIL_0005HP CIL_0005HP_0002 CGP 17:36535020-36589848
CIL_0005HQ CIL_0005HQ_0002 CGP 17:36544888-36600806

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108081 Ggnbp2-007 protein_coding Mus_musculus 0 1615
ENSMUST00000168434 Ggnbp2-001 protein_coding Mus_musculus 0 1604
ENSMUST00000172405 Ggnbp2-201 protein_coding Mus_musculus 0 1443
ENSMUST00000100686 Ggnbp2-008 protein_coding Mus_musculus 0 1432
ENSMUST00000154915 Ggnbp2-003 protein_coding Mus_musculus 0 1430
ENSMUST00000018547 Ggnbp2-002 protein_coding Mus_musculus 0 920
ENSMUST00000166425 Ggnbp2-009 protein_coding Mus_musculus 0 544
ENSMUST00000165459 Ggnbp2-010 retained_intron Mus_musculus 0 477
ENSMUST00000167429 Ggnbp2-006 processed_transcript Mus_musculus 0 305
ENSMUST00000134043 Ggnbp2-004 processed_transcript Mus_musculus 0 235
ENSMUST00000170741 Ggnbp2-012 protein_coding Mus_musculus 0.000001 60

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