C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protection of telomeres 1A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166445 Pot1a-201 ENSMUSG00000029676 10090 - 6:25744581-25798017 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000166445
Transcript ID Adipose Adrenal Bladder Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000166445 0.988±0.26 1.039±0.00 1.754±0.00 0.945±0.10 0.797±0.02 1.181±0.28 0.682±0.00 1.715±0.00 2.575±1.31 1.431±0.75 0.449±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001OL CIL_0001OL_0002 CGP 6:25743737-28135178

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000781 ISS chromosome, telomeric region
GO:0000783 IDA nuclear telomere cap complex
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0007004 ISS telomere maintenance via telomerase
GO:0042162 ISO telomeric DNA binding
GO:0043047 ISS single-stranded telomeric DNA binding
GO:0051276 IGI chromosome organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357628 POT1-001 protein_coding Homo_sapiens 0 1290
ENST00000446993 POT1-003 protein_coding Homo_sapiens 0 279
ENST00000607932 POT1-011 nonsense_mediated_decay Homo_sapiens 0 1002
ENST00000608057 POT1-012 nonsense_mediated_decay Homo_sapiens 0 701
ENST00000609106 POT1-019 nonsense_mediated_decay Homo_sapiens 0 1245
ENST00000609702 POT1-013 protein_coding Homo_sapiens 0 254

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