C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protection of telomeres 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000357628 POT1-001 ENSG00000128513 9606 - 7:124822386-124929981 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyLiverLungOvaryPlacentaENST00000357628
Transcript ID Colon Kidney Liver Lung Ovary Placenta
ENST00000357628 0.622±0.00 1.451±0.00 1.279±0.50 0.540±0.00 0.793±0.53 0.290±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001OL CIL_0001OL_0001 CGP 7:124822386-127253294

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000723 IEA:TAS telomere maintenance
GO:0000781 IDA chromosome, telomeric region
GO:0000783 IDA nuclear telomere cap complex
GO:0000784 IEA nuclear chromosome, telomeric region
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IDA cytoplasm
GO:0007004 IDA telomere maintenance via telomerase
GO:0010521 IDA telomerase inhibitor activity
GO:0016233 IMP telomere capping
GO:0017151 IPI DEAD/H-box RNA helicase binding
GO:0032203 IDA telomere formation via telomerase
GO:0032211 IMP negative regulation of telomere maintenance via telomerase
GO:0032212 IMP positive regulation of telomere maintenance via telomerase
GO:0032508 IDA DNA duplex unwinding
GO:0043047 IEA:IMP single-stranded telomeric DNA binding
GO:0051096 IDA positive regulation of helicase activity
GO:0051973 IDA positive regulation of telomerase activity
GO:0051974 IDA negative regulation of telomerase activity
GO:0060383 IDA positive regulation of DNA strand elongation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115330 Pot1a-001 protein_coding Mus_musculus 0 1315
ENSMUST00000166445 Pot1a-201 protein_coding Mus_musculus 0 1290
ENSMUST00000115329 Pot1a-002 protein_coding Mus_musculus 0 1096
ENSMUST00000115327 Pot1a-005 protein_coding Mus_musculus 0 719
ENSMUST00000156985 Pot1a-007 processed_transcript Mus_musculus 0 377

Loading