C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protection of telomeres 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000608057 POT1-012 ENSG00000128513 9606 - 7:124823962-124897184 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000608057
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000608057 1.472±0.00 1.006±0.00 3.101±0.00 2.126±0.00 0.836±0.00 1.159±0.00 2.071±0.00 0.592±0.00 0.918±0.00 0.933±0.24 3.699±0.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001OL CIL_0001OL_0001 CGP 7:124822386-127253294

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000723 IEA telomere maintenance
GO:0000784 IEA nuclear chromosome, telomeric region
GO:0003677 IEA DNA binding
GO:0043047 IEA single-stranded telomeric DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115327 Pot1a-005 protein_coding Mus_musculus 0 704
ENSMUST00000115329 Pot1a-002 protein_coding Mus_musculus 0 704
ENSMUST00000115330 Pot1a-001 protein_coding Mus_musculus 0 704
ENSMUST00000166445 Pot1a-201 protein_coding Mus_musculus 0 701
ENSMUST00000156985 Pot1a-007 processed_transcript Mus_musculus 0 377

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