C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, receptor type, O
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000167002 Ptpro-202 ENSMUSG00000030223 10090 + 6:137410721-137464629 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartLiverMuscleOvaryPlacentaTestisENSMUST00000167002
Transcript ID Adrenal Brain Breast Colon Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000167002 0.577±0.14 0.916±0.00 1.519±0.10 0.478±0.22 0.367±0.09 0.087±0.05 0.116±0.03 0.610±0.32 0.083±0.04 0.174±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000375 CIL_000375_0002 CGP 6:137054825-137464629
CIL_0005VB CIL_0005VB_0003 CGP 6:137252299-137654876

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000281171 PTPRO-001 protein_coding Homo_sapiens 0 1921
ENST00000348962 PTPRO-002 protein_coding Homo_sapiens 0 1369
ENST00000442921 PTPRO-004 protein_coding Homo_sapiens 0 1921
ENST00000445537 PTPRO-006 protein_coding Homo_sapiens 0 1727
ENST00000538907 PTPRO-009 retained_intron Homo_sapiens 0 446
ENST00000542557 PTPRO-005 protein_coding Homo_sapiens 0 1369
ENST00000544244 PTPRO-007 protein_coding Homo_sapiens 0 1175

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