C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005VB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000022297-ENSDARG00000018440 CGP 7955 19:46866733-46927512
GeneTranscriptPositionBiotype
ENSDARG00000018440 (eps8)
epidermal growth factor receptor pathway substrate 8 		ENSDART00000007012 (eps8-201) 46906272-46926958 protein_coding
ENSDART00000122849 (eps8-202) 46900125-46927512 protein_coding
ENSDART00000129833 (eps8-203) 46908516-46927512 protein_coding
ENSDARG00000022297 (ptpro)
protein tyrosine phosphatase, receptor type, O 		ENSDART00000049850 (ptpro-201) 46866733-46894947 protein_coding
ENSDART00000060242 (ptpro-202) 46875824-46893772 protein_coding
ENSDART00000110782 (ptpro-203) 46891535-46892242 protein_coding
ENSDART00000122021 (ptpro-204) 46866733-46893772 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0005VB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000151490-ENSG00000151491 CGP 9606 12:15322397-15882329
GeneTranscriptPositionBiotype
ENSG00000134533 (RERG)
RAS-like, estrogen-regulated, growth inhibitor 		ENST00000256953 (RERG-001) 15107783-15221417 protein_coding
ENST00000393736 (RERG-007) 15121065-15348598 protein_coding
ENST00000437578 (RERG-008) 15346477-15348675 processed_transcript
ENST00000536465 (RERG-005) 15107817-15218051 protein_coding
ENST00000537647 (RERG-010) 15110927-15221406 protein_coding
ENST00000537717 (RERG-006) 15217096-15221268 retained_intron
ENST00000538313 (RERG-002) 15107790-15217629 protein_coding
ENST00000545567 (RERG-009) 15109409-15138163 protein_coding
ENST00000546331 (RERG-004) 15108607-15221417 protein_coding
ENSG00000151490 (PTPRO)
protein tyrosine phosphatase, receptor type, O 		ENST00000281171 (PTPRO-001) 15322397-15597393 protein_coding
ENST00000348962 (PTPRO-002) 15322553-15597393 protein_coding
ENST00000442921 (PTPRO-004) 15546352-15597399 protein_coding
ENST00000445537 (PTPRO-006) 15546352-15597399 protein_coding
ENST00000535311 (PTPRO-011) 15546618-15580069 nonsense_mediated_decay
ENST00000535322 (PTPRO-012) 15580763-15587176 protein_coding
ENST00000538907 (PTPRO-009) 15565349-15580746 retained_intron
ENST00000542557 (PTPRO-005) 15546352-15597399 protein_coding
ENST00000543886 (PTPRO-003) 15322543-15517063 protein_coding
ENST00000544244 (PTPRO-007) 15546352-15597399 protein_coding
ENST00000544706 (PTPRO-010) 15595221-15596574 processed_transcript
ENST00000545023 (PTPRO-008) 15322777-15410766 processed_transcript
ENSG00000151491 (EPS8)
epidermal growth factor receptor pathway substrate 8 		ENST00000281172 (EPS8-001) 15620162-15789576 protein_coding
ENST00000508018 (EPS8-016) 15665349-15669467 retained_intron
ENST00000535734 (EPS8-013) 15657894-15662115 retained_intron
ENST00000535752 (EPS8-017) 15669668-15882329 protein_coding
ENST00000536793 (EPS8-009) 15670856-15789388 protein_coding
ENST00000536956 (EPS8-011) 15669466-15789400 nonsense_mediated_decay
ENST00000540613 (EPS8-005) 15621203-15662692 protein_coding
ENST00000541465 (EPS8-014) 15647150-15654430 retained_intron
ENST00000542903 (EPS8-006) 15621274-15662274 protein_coding
ENST00000543363 (EPS8-007) 15670856-15780727 protein_coding
ENST00000543468 (EPS8-002) 15620158-15789370 nonsense_mediated_decay
ENST00000543523 (EPS8-003) 15620158-15789388 protein_coding
ENST00000543612 (EPS8-004) 15620983-15712993 protein_coding
ENST00000544064 (EPS8-010) 15670859-15789381 protein_coding
ENST00000545610 (EPS8-015) 15623220-15631762 retained_intron
ENST00000546261 (EPS8-012) 15658076-15666505 nonsense_mediated_decay
ENST00000546311 (EPS8-008) 15669519-15728265 protein_coding
ENSG00000243916 (RP11-6K23.1)
 ENST00000469884 (RP11-6K23.1-001) 15439527-15440401 processed_pseudogene
ENSG00000255565 (RP11-6B19.1)
 ENST00000544015 (RP11-6B19.1-001) 15780068-15782120 lincRNA
ENSG00000256627 (RP11-6B19.3)
 ENST00000544148 (RP11-6B19.3-001) 15803164-15804158 processed_pseudogene
ENSG00000256953 (RP11-6B19.2)
 ENST00000545999 (RP11-6B19.2-001) 15813493-15828274 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0005VB_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030223-ENSMUSG00000015766 CGP 10090 6:137252299-137654876
GeneTranscriptPositionBiotype
ENSMUSG00000015766 (Eps8)
epidermal growth factor receptor pathway substrate 8 		ENSMUST00000058210 (Eps8-001) 137477245-137649285 protein_coding
ENSMUST00000100841 (Eps8-004) 137477668-137571017 protein_coding
ENSMUST00000111878 (Eps8-002) 137478177-137649285 protein_coding
ENSMUST00000127179 (Eps8-011) 137514340-137519760 processed_transcript
ENSMUST00000130274 (Eps8-005) 137478133-137519895 processed_transcript
ENSMUST00000132920 (Eps8-010) 137517071-137654876 protein_coding
ENSMUST00000134630 (Eps8-006) 137539337-137649242 protein_coding
ENSMUST00000139753 (Eps8-013) 137537638-137648283 processed_transcript
ENSMUST00000146442 (Eps8-009) 137522862-137589026 protein_coding
ENSMUST00000147526 (Eps8-003) 137499639-137648283 protein_coding
ENSMUST00000152046 (Eps8-012) 137517095-137519703 processed_transcript
ENSMUST00000153933 (Eps8-008) 137527395-137649229 processed_transcript
ENSMUST00000156916 (Eps8-007) 137572190-137649200 processed_transcript
ENSMUSG00000030223 (Ptpro)
protein tyrosine phosphatase, receptor type, O 		ENSMUST00000077115 (Ptpro-201) 137252299-137464629 protein_coding
ENSMUST00000167002 (Ptpro-202) 137410721-137464629 protein_coding
ENSMUST00000167679 (Ptpro-203) 137252299-137464629 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005VB_0001ENSDARG00000018440ENSDART00000007012ENSDART00000122849ENSDART00000129833ENSDARG00000022297ENSDART00000049850ENSDART00000060242ENSDART00000110782ENSDART00000122021CIL_0005VB_0002ENSG00000134533ENST00000256953ENST00000393736ENST00000437578ENST00000536465ENST00000537647ENST00000537717ENST00000538313ENST00000545567ENST00000546331ENSG00000151490ENST00000281171ENST00000348962ENST00000442921ENST00000445537ENST00000535311ENST00000535322ENST00000538907ENST00000542557ENST00000543886ENST00000544244ENST00000544706ENST00000545023ENSG00000151491ENST00000281172ENST00000508018ENST00000535734ENST00000535752ENST00000536793ENST00000536956ENST00000540613ENST00000541465ENST00000542903ENST00000543363ENST00000543468ENST00000543523ENST00000543612ENST00000544064ENST00000545610ENST00000546261ENST00000546311ENSG00000243916ENST00000469884ENSG00000255565ENST00000544015ENSG00000256627ENST00000544148ENSG00000256953ENST00000545999CIL_0005VB_0003ENSMUSG00000015766ENSMUST00000058210ENSMUST00000100841ENSMUST00000111878ENSMUST00000127179ENSMUST00000130274ENSMUST00000132920ENSMUST00000134630ENSMUST00000139753ENSMUST00000146442ENSMUST00000147526ENSMUST00000152046ENSMUST00000153933ENSMUST00000156916ENSMUSG00000030223ENSMUST00000077115ENSMUST00000167002ENSMUST00000167679
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005VB_0001ENSDARG00000018440ENSDART00000007012ENSDART00000122849ENSDART00000129833ENSDARG00000022297ENSDART00000049850ENSDART00000060242ENSDART00000110782ENSDART00000122021CIL_0005VB_0002ENSG00000134533ENST00000256953ENST00000537647ENST00000537717ENST00000538313ENST00000546331ENSG00000151490ENST00000281171ENST00000348962ENST00000442921ENST00000445537ENST00000535311ENST00000535322ENST00000538907ENST00000542557ENST00000543886ENST00000544244ENST00000544706ENSG00000151491ENST00000281172ENST00000540613ENST00000542903ENST00000543612ENSG00000243916ENST00000469884ENSG00000255565ENST00000544015ENSG00000256627ENST00000544148ENSG00000256953ENST00000545999CIL_0005VB_0003ENSMUSG00000015766ENSMUST00000058210ENSMUST00000100841ENSMUST00000111878ENSMUST00000130274ENSMUST00000132920ENSMUST00000134630ENSMUST00000146442ENSMUST00000147526ENSMUST00000153933ENSMUST00000156916ENSMUSG00000030223ENSMUST00000077115ENSMUST00000167002ENSMUST00000167679
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000018440 ENSDART00000007012 N/A N/A N/A 0.113±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000122849 N/A N/A N/A 3.197±0.47 N/A N/A 1.422±0.09 N/A 2.161±0.00 N/A 0.956±0.00 N/A N/A N/A
ENSDART00000129833 N/A N/A N/A 0.938±0.00 N/A N/A 0.659±0.19 N/A 3.060±0.00 N/A N/A N/A N/A N/A
ENSDARG00000022297 ENSDART00000049850 N/A N/A N/A N/A N/A N/A N/A 0.142±0.00 N/A N/A 0.398±0.00 N/A N/A N/A
ENSDART00000060242 N/A N/A N/A N/A N/A N/A 0.059±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000110782 N/A N/A N/A N/A N/A N/A 1.308±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000122021 N/A N/A N/A 25.396±0.00 N/A N/A 0.201±0.00 0.073±0.00 0.028±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000134533 ENST00000256953 4.580±0.00 12.086±0.00 3.202±0.00 3.123±0.08 5.670±2.71 9.050±6.46 0.863±0.55 8.971±8.82 6.046±0.00 5.008±0.02 1.038±0.00 6.014±4.92 7.420±2.60 9.465±8.33
ENST00000393736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.482±0.00 2.699±0.00 N/A
ENST00000537717 N/A N/A 47.325±0.00 15.164±0.00 13.463±0.00 8.405±0.00 2.300±0.00 2.851±0.00 28.779±0.00 23.651±0.00 3.388±0.00 N/A N/A N/A
ENST00000538313 N/A N/A N/A N/A N/A N/A 0.390±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000545567 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546331 1.789±0.00 N/A 2.676±0.00 N/A N/A N/A 0.774±0.00 0.613±0.00 2.700±0.00 1.413±0.00 0.360±0.00 0.314±0.00 N/A 1.070±0.00
ENSG00000151490 ENST00000281171 N/A N/A N/A 2.164±1.09 N/A N/A N/A 1.161±0.00 N/A N/A N/A N/A N/A N/A
ENST00000348962 N/A N/A 2.989±0.00 1.101±0.00 N/A 0.141±0.00 N/A 5.641±0.00 N/A N/A N/A N/A N/A N/A
ENST00000442921 N/A 0.294±0.00 N/A N/A N/A 1.218±0.00 N/A N/A N/A N/A N/A 0.520±0.14 0.253±0.00 0.320±0.00
ENST00000445537 N/A 0.333±0.00 0.726±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.772±0.65 0.145±0.00 N/A
ENST00000535311 N/A N/A N/A N/A N/A N/A N/A 0.756±0.00 N/A N/A N/A N/A N/A N/A
ENST00000535322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.250±0.00 N/A N/A N/A
ENST00000538907 N/A N/A N/A N/A 1.811±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542557 0.405±0.00 N/A N/A N/A 0.355±0.03 0.376±0.00 N/A N/A 0.161±0.01 0.907±0.00 0.082±0.00 0.679±0.56 1.072±0.36 0.262±0.00
ENST00000543886 N/A N/A N/A N/A N/A N/A N/A N/A 0.139±0.00 N/A 0.058±0.00 N/A N/A N/A
ENST00000544244 0.161±0.00 N/A N/A 0.652±0.00 N/A 0.149±0.00 N/A 0.808±0.53 N/A N/A N/A 0.667±0.00 0.199±0.05 N/A
ENST00000544706 N/A N/A N/A N/A N/A N/A N/A 0.862±0.00 0.167±0.00 N/A 0.256±0.00 0.561±0.00 N/A N/A
ENST00000545023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000151491 ENST00000281172 43.524±0.00 10.512±0.00 4.067±0.00 3.842±2.37 11.708±5.26 11.607±7.32 3.666±2.71 7.967±5.55 10.235±5.89 6.116±0.92 1.655±1.44 11.548±3.12 10.373±3.58 6.681±0.00
ENST00000508018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536956 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540613 N/A N/A N/A 0.613±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542903 N/A N/A N/A N/A N/A N/A 3.030±0.00 N/A N/A 3.635±0.00 1.917±0.00 24.379±0.00 10.834±0.00 6.516±0.00
ENST00000543363 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543468 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543612 N/A N/A N/A N/A N/A 2.216±0.00 0.616±0.00 1.301±0.00 N/A 2.819±0.00 N/A 8.013±0.00 N/A N/A
ENST00000544064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546311 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000243916 ENST00000469884 N/A 0.046±0.00 N/A N/A 0.025±0.00 0.022±0.00 N/A 0.024±0.00 N/A 0.022±0.00 0.117±0.00 0.057±0.00 N/A 0.021±0.00
ENSG00000255565 ENST00000544015 0.158±0.00 0.292±0.00 1.497±0.00 0.027±0.00 N/A N/A 0.097±0.00 N/A N/A 1.924±1.88 N/A 3.483±3.31 0.079±0.00 1.100±0.70
ENSG00000256627 ENST00000544148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.145±0.00
ENSG00000256953 ENST00000545999 N/A N/A N/A 0.143±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.103±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000015766 ENSMUST00000058210 1.415±0.44 4.174±0.80 2.145±1.07 0.876±0.24 3.282±1.39 8.167±1.46 1.499±0.35 4.059±0.45 0.207±0.13 5.649±1.39 0.284±0.13 5.578±2.86 2.037±0.65 1.662±0.17
ENSMUST00000100841 2.717±0.94 1.999±0.00 1.734±0.36 0.555±0.21 1.565±0.53 13.039±2.12 0.773±0.26 16.511±1.85 0.162±0.08 N/A 0.372±0.21 3.354±1.16 5.363±3.21 N/A
ENSMUST00000111878 1.263±0.16 3.706±0.00 N/A 2.442±1.37 2.938±1.22 11.270±4.38 0.962±0.00 N/A 0.171±0.07 3.848±1.49 0.244±0.08 2.759±0.68 4.111±1.43 1.216±0.49
ENSMUST00000127179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130274 2.075±0.01 4.766±0.00 N/A N/A 2.484±0.11 16.563±0.94 1.186±0.39 10.526±0.31 0.349±0.05 N/A N/A 5.355±1.74 0.904±0.00 0.849±0.18
ENSMUST00000132920 N/A N/A N/A N/A N/A N/A N/A N/A 0.327±0.00 N/A N/A N/A N/A N/A
ENSMUST00000134630 N/A 14.642±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146442 N/A N/A N/A 16.799±0.00 N/A N/A N/A N/A N/A N/A N/A 20.308±0.00 31.585±13.10 N/A
ENSMUST00000147526 1.760±0.45 4.713±0.00 N/A N/A 4.089±0.23 18.919±4.63 N/A 10.215±1.26 0.297±0.12 4.493±0.80 N/A 7.238±2.55 N/A 1.458±0.31
ENSMUST00000152046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153933 11.386±0.42 29.895±11.69 N/A 19.168±0.00 20.557±7.41 N/A N/A N/A 1.049±0.09 23.041±10.19 N/A 28.365±10.56 36.450±16.41 N/A
ENSMUST00000156916 N/A 34.875±10.47 N/A N/A N/A N/A N/A N/A 1.187±0.14 N/A N/A N/A N/A N/A
ENSMUSG00000030223 ENSMUST00000077115 N/A N/A 0.084±0.00 7.192±3.99 N/A N/A N/A 0.922±0.55 N/A N/A N/A N/A 0.012±0.00 1.036±0.83
ENSMUST00000167002 N/A 0.577±0.14 N/A 0.916±0.00 1.519±0.10 0.478±0.22 0.367±0.09 N/A 0.087±0.05 N/A 0.116±0.03 0.610±0.32 0.083±0.04 0.174±0.03
ENSMUST00000167679 0.142±0.00 0.049±0.01 N/A N/A N/A 0.261±0.05 N/A 2.509±1.14 0.013±0.00 N/A 0.021±0.00 0.094±0.04 0.047±0.04 0.272±0.00

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