C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | staphylococcal nuclease and tudor domain containing 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000167201  |
Snd1-003 |
ENSMUSG00000001424 |
10090 | + |
6:28480359-28935162  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008LN | CIL_0008LN_0002 | VISTA | 6:28095025-28698247 |
| CIL_0001OG | CIL_0001OG_0002 | CGP | 6:28442334-28935162 |
| CIL_0004Y2 | CIL_0004Y2_0003 | CGP | 6:28475139-28935162 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003676 | IEA | nucleic acid binding |
| GO:0004518 | IEA | nuclease activity |
| GO:0005515 | IPI | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0005737 | IDA | cytoplasm |
| GO:0005739 | IDA | mitochondrion |
| GO:0090305 | IEA | nucleic acid phosphodiester bond hydrolysis |
| GO:0097433 | IDA | dense body |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000354725
|
SND1-001 | protein_coding | Homo_sapiens | 0 | 2484 |
|
ENST00000461056
|
SND1-002 | processed_transcript | Homo_sapiens | 0 | 459 |
|
ENST00000463020
|
SND1-013 | retained_intron | Homo_sapiens | 0 | 396 |
|
ENST00000465900
|
SND1-007 | processed_transcript | Homo_sapiens | 0 | 734 |
|
ENST00000468166
|
SND1-006 | processed_transcript | Homo_sapiens | 0 | 490 |
|
ENST00000468621
|
SND1-003 | processed_transcript | Homo_sapiens | 0 | 540 |
|
ENST00000483503
|
SND1-004 | processed_transcript | Homo_sapiens | 0 | 632 |
|
ENST00000486037
|
SND1-016 | protein_coding | Homo_sapiens | 0 | 549 |
|
ENST00000492772
|
SND1-005 | processed_transcript | Homo_sapiens | 0 | 664 |
